Please see pdf for full CV.
Education
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Vancouver, Canada
University of British Columbia
PhD - Bioinformatics
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College Station, USA
Texas A&M University
MS - Computer Science
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Lubbock, USA
Texas Tech University
BS - Molecular Biology
Work
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2022.01 - Present British Columbia Cancer Center, Vancouver, BC, Canada
Graduate Research Assistant (PhD)
Develop novel computational methods for large-scale omics data for interpretable deep learning models,scalable annotation, and multimodal data integration
- Languages (Python, C++, R, Bash), deep learning (NNs, CNNs, RNNs, Transformers, GNNs, VAEs), libraries (PyTorch, scikit-learn), data science (feature engineering, latent variable models, optimization)
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2018.01 - 2021.10 Houston Methodist Hospital, Texas, USA
Bioinformatician
Design and implement bioinformatics pipelines for cancer assays, real-time pathology analytics, and clinical tools. Collaborate with internal cross-functional teams and third-party vendors for data management and systems integration in the CLIA-certified diagnostics laboratory.
- Sequencing (Illunima, Ion, Nanopore), pipelines (cancer panel, WES, TMB, COVID), workflow (snakemake, singularity, conda), EHR/clinical reporting (Java, SQL, Epic systems, Tableau), HPC (PBS Torque, Azure)